NAME
copymat − convert ASCII matrices into a database suitable for quick reading
SYNOPSIS
copymat [−] [−H] [−P filename] [−W N] [−f X] [−r F]
DESCRIPTION
copymat converts ASCII matrices produced by makemat(1) into a database that can be read into memory quickly.
OPTIONS
A summary of options is included below.
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− |
Print usage message |
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−H |
Print help; overrides all other arguments |
−P filename
Database for matrix profiles (default = stdin)
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−W N |
Word size for RPS database (default = 3) | ||
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−f X |
Threshold for extending hits for RPS database (default = 11.0) | ||
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−r F |
Do not create RPS mem map file(s) |
AUTHOR
The National Center for Biotechnology Information.
SEE ALSO
impala(1), makemat(1), /usr/share/doc/blast2/impala.html